Abstract
Previous research has shown that using DNA probes to identify the presence of specific bacteria in human plaque samples is superior to the commonly used anaerobic cultural procedures. Some periodontal pathogens are either uncultivable or very difficult to grow, such as Prevotella intermedia, P. nigrescens, and Eubacterium brachy. Digoxygenin probes were prepared for 15 oral bacteria. These probes were used with a checkerboard DNA-DNA hybridization scheme to analyze whether human plaque samples contained any of the 15 bacterial species. Our results have shown that this method is successful in identifying bacterial DNA present in the subgingival patient plaque samples. Probe cross-reactivity tests were also performed and have shown that there was very little cross-reactivity between the 15 bacterial species used. This method can be used for rapid and specific identification (compared to current anaerobic culturing methods) of bacterial species in human plaque samples, thus potentially facilitating treatment for pathogens implicated in periodontal diseases.
LLU Discipline
Microbiology and Molecular Genetics
Department
Microbiology, Molecular Biology and Biochemistry
School
Graduate School
First Advisor
James D. Kettering
Second Advisor
Hansel M. Fletcher
Third Advisor
Yiming Li
Degree Name
Master of Science (MS)
Degree Level
M.S.
Year Degree Awarded
1999
Date (Title Page)
6-1999
Language
English
Library of Congress/MESH Subject Headings
DNA Probes; Nucleic Acid Hybridization; Gram-Positive Bacteria; Gram-Negative Bacteria; Periodontal Diseases -- microbiology; Tooth -- microbiology.
Type
Thesis
Page Count
ix; 110
Digital Format
Digital Publisher
Loma Linda University Libraries
Copyright
Author
Usage Rights
This title appears here courtesy of the author, who has granted Loma Linda University a limited, non-exclusive right to make this publication available to the public. The author retains all other copyrights.
Recommended Citation
Zimmerman, Jasan Lee, "DNA-DNA Checkerboard Hybridization to Identify Bacteria in Human Plaque Samples" (1999). Loma Linda University Electronic Theses, Dissertations & Projects. 820.
https://scholarsrepository.llu.edu/etd/820
Collection
Loma Linda University Electronic Theses and Dissertations
Collection Website
http://scholarsrepository.llu.edu/etd/
Repository
Loma Linda University. Del E. Webb Memorial Library. University Archives
Included in
Microbiology Commons, Molecular Genetics Commons, Periodontics and Periodontology Commons